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Matrix Science mascot search engine (version mascot 2.4.1
Mascot Search Engine (Version Mascot 2.4.1, supplied by Matrix Science, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/mascot+search+engine+version+2%2E4%2E1/mascot+search+engine/pmc11761162-106-5-11
Average 90 stars, based on 1 article reviews
mascot search engine (version mascot 2.4.1 - by Bioz Stars, 2026-09
90/100 stars

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Tandem Mass Spectroscopy:

Article Title: Identifying novel allergens from a common indoor mould Aspergillus ochraceus.
Article Snippet: The increasing burden of respiratory disease is a rising concern in India.. Although chronic colonisation is primarily caused by pathogenic fungi, the common environmental fungi also play an important role in developing sensitisation.. This study aims to examine the allergenic potency of mycelial proteins of a common indoor fungus Aspergillus ochraceus to a selected atopic patient cohort as well as to identify the novel IgE-binding proteins through an immunoproteomic approach.

Article Title: Staphylococcus aureus Prophage-Encoded Protein Causes Abortive Infection and Provides Population Immunity against Kayviruses
Article Snippet: MS/MS data were searched against a custom database of expected amino acid sequences and in parallel against the NCBIprot database ( https://ftp.ncbi.nih.gov/blast/db/FASTA/ ) using an in-house Mascot search engine version 2.4.1 (Matrix Science, UK).

Article Title: Differences in the expression of soluble proteins in freshwater and brackish‐water ecotypes of the snail <scp><i>Theodoxus fluviatilis</i></scp>
Article Snippet: The MS and MS/MS spectra that were obtained via the 4,000 Explorer Software V3.5.3 (Applied Biosystems, Waltham, MA, USA) were matched to a transcriptome database for Theodoxus fluviatilis (GenBank, accession number: PRJNA750758) using the MASCOT Search Engine Version 2.4.1 (Matrix Science Ltd, London, UK) and the MASCOT MS/MS databank search function (details on the Theodoxus fluviatilis transcriptome database generation can be found in Appendix S1).

Article Title: Hepatic urea, creatinine and uric acid metabolism in dairy cows with divergent milk urea concentrations.
Article Snippet: For the identification of the proteins, data base search with peptide mass fingerprint (PMF) was performed against the NCBInr (National Center for Biontechnology Information, http:// www. ncbi. nlm. nih. gov/) database using the Mascot search engine version 2.4.1 (Matrix Science, London, UK).

Software:

Article Title: Identifying novel allergens from a common indoor mould Aspergillus ochraceus.
Article Snippet: The increasing burden of respiratory disease is a rising concern in India.. Although chronic colonisation is primarily caused by pathogenic fungi, the common environmental fungi also play an important role in developing sensitisation.. This study aims to examine the allergenic potency of mycelial proteins of a common indoor fungus Aspergillus ochraceus to a selected atopic patient cohort as well as to identify the novel IgE-binding proteins through an immunoproteomic approach.

Article Title: Staphylococcus aureus Prophage-Encoded Protein Causes Abortive Infection and Provides Population Immunity against Kayviruses
Article Snippet: MS/MS data were searched against a custom database of expected amino acid sequences and in parallel against the NCBIprot database ( https://ftp.ncbi.nih.gov/blast/db/FASTA/ ) using an in-house Mascot search engine version 2.4.1 (Matrix Science, UK).

Article Title: Differences in the expression of soluble proteins in freshwater and brackish‐water ecotypes of the snail <scp><i>Theodoxus fluviatilis</i></scp>
Article Snippet: The MS and MS/MS spectra that were obtained via the 4,000 Explorer Software V3.5.3 (Applied Biosystems, Waltham, MA, USA) were matched to a transcriptome database for Theodoxus fluviatilis (GenBank, accession number: PRJNA750758) using the MASCOT Search Engine Version 2.4.1 (Matrix Science Ltd, London, UK) and the MASCOT MS/MS databank search function (details on the Theodoxus fluviatilis transcriptome database generation can be found in Appendix S1).

Article Title: Hepatic urea, creatinine and uric acid metabolism in dairy cows with divergent milk urea concentrations.
Article Snippet: For the identification of the proteins, data base search with peptide mass fingerprint (PMF) was performed against the NCBInr (National Center for Biontechnology Information, http:// www. ncbi. nlm. nih. gov/) database using the Mascot search engine version 2.4.1 (Matrix Science, London, UK).



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